Publications
Wan, J., M. Torres, A. Ganapathy, J. Thelen, B. B. DaGue, B. Mooney, D. Xu, and G. Stacey. (2005) "Proteomic analysis of soybean root hairs after infection by Bradyrhizobium japonicum", Mol. Plant-Microbe Int. 18: p. 458. DOI: 10.1094/MPMI-18-0458.
Stacey G, Libault M, Brechenmacher L, Wan J, May GD (2006) "Genetics and functional genomics of legume nodulation.” Curr. Opin. Plant Biol. 9: p. 110. doi:10.1016/j.pbi.2006.01.005
Song, Z., Chen, L, Ganapathy, A., Wan, X-F, Brechenmacher, L., Tao, N., Emerich, D., Stacey, G, Xu, Dong (2007) "Development and assessment of scoring functions for protein identification using peptide mass fingerprinting data.", Electrophoresis 28: p. 864. DOI: 10.1002/elps.200600305
Stacey, G, McAlvin, C.B., Kim, S-Y, Olivares, J., Soto, M.J. (2006) "Effects of endogenous salicylic acid on nodulation in the model legumes Lotus japonicus and Medicago truncatula.", Plant Physiol. 141: p. 1473. DOI: 10.1104/pp.106.08098
Subramanian S, Stacey G, Yu Oliver (2006) "Endogenous isoflavones are essential for the establishment of symbiosis between soybean and Bradyrhizobium japonicum", Plant Journal 48: p. 261. DOI: 10.1111/j.1365-313X.2006.02874.x
Subramanian S, Stacey G, Yu O (2007) "Distinct, critical roles of flavonoids during determinate and indeterminate legume nodulation." Trends in Plant Science 12: p. 282 . DOI: 10.1016/j.tplants.2007.06.006
Song Z, Chen L, Ganapathy A, Wan X-F, Brechenmacher L, Tao N, Emerich D, Stacey G, Xu D (2007) “Development and assessment of scoring functions for protein identification using peptide mass fingerprinting data.” Electrophoresis 28: p. 864.
Libault M, Thibivilliers S, Radman O, Clough SJ, Stacey G (2008) “Identification of four soybean reference genes for gene expression normalization.” Plant Genome. 1: p. 44.
Govindarajulu M, Elmore JM, Fester T, Taylor CG. (2008) “Evaluation of constitutive viral promoters in transgenic soybean roots and nodules.” Molecular Plant-Microbe Interactions 21: p. 1027 (cover photo).
Brechenmacher L, Kim MY, Benitez M, Li M, Joshi T, Calla B, Lee MP, Libault M, Vodkin LO, Xu D, Lee SH, Clough SJ, Stacey G (2008) “Transcription profiling of soybean nodulation by Bradyrhizobium japonicum.” Molecular Plant-Microbe Interactions. 21: p. 631.
Govindarajulu M, Kim S-Y, Libault M, Berg RH, Tanaka K, et al. (2009) “GS52 ecto-apyrase plays a critical role during soybean nodulation.” Plant Physiol.: 149: p. 994.
Brechenmacher L, Lee J, Sachdev S, Song Z, Nguyen THN, Trupti J, Dague B, Oehrle N, Libault M, Mooney B, Xu D, Cooper B, Stacey G (2009) “Establishment of a protein reference map for soybean root hair cells.” Plant Physiol. 149: p. 670.
Dalton DA, Boniface C, Turner Z, Lindahl A, Kim HJ, Jelinek L, Govindarajulu M, Finger RE, Taylor CG (2009) “Physiological roles of Glutathione S-transferases in soybean root nodules.” Plant Physiology (in press).
Zhang J, Subramanian S, Stacey G, Oliver Y (2009) “Flavones and flavanols play distinct, critical roles during nodulation of Medicago truncatula by Sinorhizobium meliloti.” Plant J. 57: p. 171.
Joshi T, Yan Z, Libault M, Jeong H, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers B, Xu D, Stacey G (2009) “Prediction of novel miRNAs and associated target genes in Glycine max.” BMC Bioinformatics (in press).
Libault M, Joshi T, Takahashi K, Hurley-Sommer A, Puricelli K, Blake S, Xu D, Nguyen H, Stacey G (2009) “Large scale analysis of soybean regulatory gene expression identifies a Myb gene involved in nodule development.” Plant Physiol. (in press).
Libault M, Udvardi M, Stacey G (2009) “Legume transcription factors; What makes legumes so special?” Plant Physiol. (in press).
Brechenmacher L, Lee J, Sachdev S, Song Z, Nguyen TH, et al. 2009. Establishment of a protein reference map for soybean root hair cells. Plant Physiol 149: 670-82
Brechenmacher, L, Zhentian Lei, Marc Libault, Seth Findley, Masayuki Sugawara,
Michael J Sadowsky, Lloyd W Sumner, and Gary Stacey (2010) Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum. Plant J. (submitted)
Collier R, Fuchs B, Walter N, Lutke WK, Taylor CG. 2005. Ex vitro composite plants: an inexpensive, rapid method for root biology. The Plant Journal 43: 449-57
Govindarajulu M, Elmore JM, Fester T, Taylor CG. 2008. Evaluation of constitutive viral promoters in transgenic soybean roots and nodules. Molecular Plant-Microbe Interactions 21: 1027-35
Govindarajulu M, Kim SY, Libault M, Berg RH, Tanaka K, et al. 2009. GS52 ecto-apyrase plays a critical role during soybean nodulation. Plant Physiol 149: 994-1004
Joshi T, Yan Z, Libault M, Jeong H, Park S, et al. 2010. Prediction of novel miRNAs and associated target genes in Glycine max BMC Bioinformatics 11(Suppl 1): S14
Libault M, Farmer A, Brechenmacher L, Drnevich J, Langley RJ, et al. 2010. Complete transcriptome of the soybean root hair cell, a single cell model, and its alteration in response to Bradyrhizobium japonicum infection. Plant Physiol. 152: 541-52
Libault M, Farmer A, Joshi T, Takahashi K, Langley RJ, et al. 2010. An integrated transcriptome atlas of the crop model Glycine max and its use in comparative analysis in plants. Plant Journal submitted
Libault M, Joshi T, Benedito VA, Xu D, Udvardi MK, Stacey G. 2009. Legume transcription factor genes: what makes legumes so special? Plant Physiol 151: 991-1001
Libault M, Joshi T, Takahashi K, Hurley-Sommer A, Puricelli K, et al. 2009. Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development. Plant Physiol 151: 1207-20
Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, et al. 2010. Genome sequence of the paleopolyploid soybean (Glycine max (L.) Merr.). . Nature 463: 178-183
Veena V, Taylor C. 2007. Agrobacterium rhizogenes: recent developments and promising applications. In Vitro Cellular & Developmental Biology - Plant 43: 383-403
Wan JR, Torres M, Ganapathy A, Thelen J, DaGue BB, et al. 2005. Proteomic analysis of soybean root hairs after infection by Bradyrhizobium japonicum. Molecular Plant-Microbe Interactions 18: 458-67
Wang Z, Libault M, Joshi T, Valliyodan B, Nguyen HT, et al. 2009. SoyDB: A knowledge database of soybean transcription factors. BMC Plant Biology in press